I look at it this way, if that is the only two choices for your rig then go with what you feel is best. You did not put any info down for your rig so now all is guess work on any of our opinions. I guess I could just wing it and assume you have the only 2000-2006 rig that is exactly like every other 2000-2006 rig out there.
Like shocks, I have never seen light duty shocks. They are always at least heavy duty shocks. The heavy duty fan clutch is likely the most light duty of the two. Is there any way to compare what you already have on the rig to see what the big difference would be?
By the way, you can thank
@Galante for my smart ass remarks about the rig info. He doesn't like it when I post the easiest way for you to ALWAYS share the right rig info. Ask him for the explanation for this. I am sure he will be happy to share.